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BiodiversityR: Package for Community Ecology and Suitability Analysis

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Graphical User Interface (via the R-Commander) and utility functions (often based on the vegan package) for statistical analysis of biodiversity and ecological communities including species accumulation curves diversity indices Renyi profiles GLMs for analysis of species abundance and presence-absence distance matrices Mantel tests and cluster constrained and unconstrained ordination analysis. A book on biodiversity and community ecology analysis is available for free download from the website. In 2012 methods for (ensemble) suitability modelling and mapping were expanded in the package. License GPL-2 URL http://www.r-project.org http://www.worldagroforestry.org/output/tree-diversity-analysis Depends R (>= 3.2.2) tcltk vegan (>= 2.4-0) Imports Rcmdr (>= 2.3-0). Installation guidelines for windows users are available from URL http://dx.doi.org/10.13140/RG.2.1.4706.0082. A tutorial for ensemble suitability modelling is available from URL http://dx.doi.org/10.13140/RG.2.1.1993.7684. BiodiversityR: Package for Community Ecology and Suitability Analysis. Version 2.7-2. URL https://CRAN.R-project.org/package=BiodiversityR (PDF Download Available). Available from: https://www.researchgate.net/publication/307597516_BiodiversityR_Package_for_Community_Ecology_and_Suitability_Analysis_Version_27-2_URL_httpsCRANR-projectorgpackageBiodiversityR [accessed Nov 22 2017].

DOI:
Graphical User Interface (via the R-Commander) and utility functions (often based on the vegan package) for statistical analysis of biodiversity and ecological communities including species accumulation curves diversity indices Renyi profiles GLMs for analysis of species abundance and presence-absence distance matrices Mantel tests and cluster constrained and unconstrained ordination analysis. A book on biodiversity and community ecology analysis is available for free download from the website. In 2012 methods for (ensemble) suitability modelling and mapping were expanded in the package. License GPL-2 URL http://www.r-project.org http://www.worldagroforestry.org/output/tree-diversity-analysis Depends R (>= 3.2.2) tcltk vegan (>= 2.4-0) Imports Rcmdr (>= 2.3-0). Installation guidelines for windows users are available from URL http://dx.doi.org/10.13140/RG.2.1.4706.0082. A tutorial for ensemble suitability modelling is available from URL http://dx.doi.org/10.13140/RG.2.1.1993.7684. BiodiversityR: Package for Community Ecology and Suitability Analysis. Version 2.7-2. URL https://CRAN.R-project.org/package=BiodiversityR (PDF Download Available). Available from: https://www.researchgate.net/publication/307597516_BiodiversityR_Package_for_Community_Ecology_and_Suitability_Analysis_Version_27-2_URL_httpsCRANR-projectorgpackageBiodiversityR [accessed Nov 22 2017].
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    Publication year

    2016

    Authors

    Kindt, R.

    Keywords

    Information technology, Statistical analysis, Research tools, Agroforestry technologies

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